Chromosome 7 Haplotype

Chromosome 7

Run ID: 3291 Total SNPs: 5147 Total Blocks: 633 Coverage: .8 Minimum Strains: 9

block 1	XXX	XXXX	A/H	A/J	AKR	B10	B/B	B/C	BUB	C57	DBA	FVB	NZB	SMJ		129	C3H	LGJ	LPJ	MRL		NZW
	3		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	0		3,361,099

block 2	XXX	XXXX	A/H	A/J	B/B	BUB	NZW	SMJ	FVB	MRL		129	B/C	C3H	LPJ	NZB		B10	C57	DBA		AKR	LGJ
ENS::41596	7		2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	2	2	2	X	0	0		7,265,880
			2	2	2	2	2	2	0	0	X	2	2	2	2	2	X	1	1	1	X	0	0		7,265,882

129	A/H	A/J	B/B	B/C	BUB	C3H	NZB	NZW	LPJ		B10	DBA	MRL	AKR	LGJ	C57	SMJ
2	2	2	2	2	2	2	2	2	2	X	1	1	1	0	0	0	0	X	7,265,957
2	2	2	2	2	2	2	2	2	2	X	1	1	1	0	0	1	0	X	7,266,111
2	2	2	2	2	2	2	2	2	2	X	1	1	1	0	1	0	0	X	7,266,191
2	2	2	2	2	2	2	2	2	2	X	1	1	1	0	1	0	0	X	7,266,198
2	2	2	2	2	2	2	2	2	2	X	1	0	0	1	0	0	0	X	7,266,205
2	2	2	2	2	2	2	2	2	2	X	0	0	0	1	0	0	0	X	7,266,257
2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	0	1	X	7,266,295
2	2	2	2	2	2	2	2	2	0	X	1	1	1	1	1	0	0	X	7,266,305

A/H	A/J	B/B	B/C	BUB	NZB	129	C3H	AKR	SMJ		B10	LGJ	C57	DBA	FVB	LPJ	MRL		NZW
2	2	2	2	2	2	2	2	0	0	X	1	1	1	1	1	1	1	X	2	7,266,381
2	2	2	2	2	2	2	2	0	0	X	1	1	0	0	0	0	0	X	2	7,266,386
2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	2	2	X	1	7,282,505
2	2	2	2	2	2	0	0	2	2	X	2	2	2	2	2	0	0	X	1	7,282,562

block 5	XXX	XXXX	A/H	A/J	AKR	B/C	C3H	DBA	MRL	NZB	NZW		B10	C57		129	B/B	BUB	FVB	LGJ	LPJ	SMJ
C5r1			2	2	2	2	2	2	2	2	2	X	1	1	X	0	0	0	0	0	0	0		7,927,662

block 6	XXX	B/B	DBA	SMJ	A/J	B/C	BUB	LGJ	AKR	B10	C57	A/H	MRL		129	LPJ	C3H	NZB	NZW		FVB
	8	2	2	2	2	2	2	2	2	2	2	0	0	X	1	1	1	1	1	X	0	8,466,197
		2	2	2	2	2	2	2	2	2	2	0	0	X	1	1	1	1	1	X	0	8,466,198
		2	2	2	2	2	2	2	2	2	2	0	0	X	1	1	1	1	1	X	0	8,466,222
		2	2	2	2	2	2	2	2	2	2	0	0	X	1	1	1	1	1	X	0	8,466,326
		2	2	2	2	2	2	2	2	2	2	0	2	X	0	0	0	0	0	X	1	8,466,668
		2	2	2	2	2	2	2	2	2	2	0	2	X	0	0	0	0	0	X	1	8,466,812
		2	2	2	2	2	2	2	2	0	0	2	0	X	1	1	1	1	1	X	1	8,467,194
		2	2	2	2	2	2	2	2	0	0	2	0	X	1	1	1	1	1	X	2	8,467,222
		2	2	2	2	2	2	2	2	0	0	2	0	X	1	1	1	1	1	X	2	8,467,280
Slc1a5		2	2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	8,471,955
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	8,471,962
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	8,471,989
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	8,472,190
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	8,472,353
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	8,472,457
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	2	8,472,501
		2	2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	8,472,626
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	8,472,781
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	0	1	X	1	8,473,260
		2	2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	8,473,283
		2	2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	8,473,290
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	0	X	1	8,473,319
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	8,473,349
		2	2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	8,473,480
		2	2	2	2	2	2	2	2	0	2	2	2	X	1	1	1	1	1	X	2	8,475,540
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	2	8,475,656
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	2	8,475,715
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	2	8,475,898
		2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	2	8,475,900
		2	2	2	2	0	0	0	0	2	0	0	2	X	1	1	0	1	0	X	0	8,479,576
		2	2	2	0	2	2	2	0	2	2	2	2	X	1	1	1	1	1	X	2	8,480,345

block 7	XXX	XXXX	129	A/H	DBA	FVB	LPJ	NZB	NZW	C3H		A/J	B10	B/C	BUB	C57		AKR	B/B	LGJ	MRL	SMJ
			2	2	2	2	2	2	2	0	X	1	0	0	1	1	X	0	0	0	0	0		8,480,350
			2	2	2	2	2	2	2	2	X	1	1	1	0	0	X	0	0	0	0	0		8,480,391

C57	LGJ	MRL	SMJ	A/H	A/J	AKR	DBA	B/B	BUB	FVB	B10	B/C		C3H	LPJ	NZB	NZW	129
2	2	2	2	0	2	0	0	0	0	0	2	2	X	1	1	1	1	1	8,480,405
2	2	2	2	2	0	2	2	2	2	2	2	0	X	1	1	0	0	0	8,481,586
2	2	2	2	2	2	2	2	2	2	0	0	0	X	1	1	1	1	0	8,481,620
2	2	2	2	2	2	2	2	2	2	2	0	0	X	1	1	1	0	0	8,481,633
2	2	2	2	2	2	2	2	2	2	2	2	0	X	1	1	1	0	0	8,481,705
2	2	2	2	2	2	2	2	2	2	2	2	0	X	1	1	1	0	0	8,481,743
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,482,148
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,482,149
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,482,334
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,482,340
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,482,435
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,482,438
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,482,444
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,482,447
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,482,452
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,482,455
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,482,701
2	2	2	2	2	2	2	2	0	0	2	0	2	X	1	1	1	1	1	8,483,544

block 9	XXX	XXXX	129	A/H	A/J	AKR	B/C	C3H	C57	DBA	FVB	LGJ	LPJ	MRL	NZB	NZW	SMJ		B/B		B10	BUB
			2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	X	0	0		8,483,600

A/H	B/C	DBA	FVB	LGJ	MRL	A/J	C57	SMJ	AKR	B/B	BUB	B10		129	C3H	LPJ	NZB	NZW
2	2	2	2	2	2	2	2	2	2	0	0	0	X	1	1	1	1	1	8,483,644
2	2	2	2	2	2	2	2	2	2	0	0	0	X	1	1	1	1	1	8,483,680
2	2	2	2	2	2	2	2	2	2	0	0	0	X	1	1	1	1	1	8,483,683
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,483,908
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,484,011
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,484,059
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,484,060
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,484,073
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,484,119
2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	8,484,267
2	2	2	2	2	2	0	2	2	0	2	2	2	X	1	1	1	1	1	8,484,585
2	2	2	2	2	2	2	2	2	0	2	2	0	X	1	1	1	1	1	8,484,724
2	2	2	2	2	2	2	0	0	0	2	2	2	X	1	1	1	1	1	8,484,742

block 11	XXX	XXXX	129	B/B	BUB	C3H	DBA	FVB	NZW	A/H	B/C	C57	LPJ	NZB		LGJ	MRL		A/J		AKR	B10	SMJ
			2	2	2	2	2	2	2	2	2	2	2	2	X	2	2	X	1	X	0	0	0		8,484,754
			2	2	2	2	2	2	2	0	0	0	0	0	X	1	1	X	0	X	0	0	0		8,484,821

block 12	XXX	A/J	AKR	B/C	DBA	MRL	B/B	A/H		129	NZW	C3H	NZB		C57	B10
Dm15	10	2	2	2	2	2	2	0	X	2	2	2	2	X	1	1	X	10,609,346
		2	2	2	2	2	2	2	X	1	1	1	0	X	2	2	X	10,610,884
		2	2	2	2	2	2	2	X	1	1	1	0	X	1	1	X	10,610,885
		2	2	2	2	2	2	2	X	2	2	2	2	X	1	1	X	10,611,166
		2	2	2	2	2	2	2	X	1	1	1	1	X	2	2	X	10,611,184
		2	2	2	2	2	2	2	X	2	2	2	2	X	1	0	X	10,611,210
		2	2	2	2	2	2	2	X	1	1	1	1	X	2	2	X	10,611,460
		2	2	2	2	2	2	2	X	1	1	1	1	X	2	2	X	10,611,461
		2	2	2	2	2	0	0	X	2	2	0	2	X	1	1	X	10,614,291
		2	2	2	2	2	2	2	X	1	1	1	1	X	2	2	X	10,614,415
		1	1	1	1	1	1	0	X	2	2	2	2	X	2	2	X	10,614,513

block 13	XXX	XXXX	129	A/H	A/J	B10	B/B	B/C	C3H	C57	DBA	MRL	NZB	NZW		AKR		BUB	FVB	LGJ	LPJ	SMJ
			2	2	2	2	2	2	2	2	2	2	2	2	X	1	X	0	0	0	0	0		10,614,577

block 14	XXX	XXXX	AKR	B/B	DBA	MRL	A/J	B/C	A/H		129	C3H	NZB	NZW		B10	C57		BUB	FVB	LGJ	LPJ	SMJ