Chromosome 15 Haplotype

Chromosome 15

Run ID: 3299 Total SNPs: 1279 Total Blocks: 198 Coverage: .8 Minimum Strains: 9

block 1	XXX	XXXX	A/H	B10	B/B	B/C	C3H	C57	LGJ	MRL		AKR	DBA	LPJ	NZB	NZW	SMJ		129	A/J	BUB	FVB
Ghr	3		2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	X	0	0	0	0		3,411,561

AKR	C3H	DBA	LPJ	NZB	SMJ		A/H	B10	B/B	LGJ	MRL		B/C
1	1	1	1	1	1	X	2	2	2	2	2	X	2	X	3,411,846
1	1	1	1	1	1	X	2	2	2	2	2	X	2	X	3,411,853
2	2	2	2	2	2	X	2	2	2	2	2	X	1	X	3,411,859
2	2	2	2	2	2	X	2	2	2	2	2	X	1	X	3,411,860
2	2	2	2	2	2	X	2	2	2	2	2	X	1	X	3,411,861
2	2	2	2	2	2	X	2	2	2	2	2	X	1	X	3,411,863
2	2	2	2	2	2	X	1	1	1	1	1	X	1	X	3,411,867
2	2	2	2	2	2	X	1	1	1	1	1	X	1	X	3,411,868
1	1	1	1	1	1	X	2	2	2	2	2	X	2	X	3,411,871
2	2	2	2	2	2	X	1	1	1	1	1	X	1	X	3,411,873
1	1	1	1	1	1	X	2	2	2	2	2	X	2	X	3,411,874
2	2	2	2	2	2	X	1	1	1	1	1	X	1	X	3,411,875

block 3	XXX	XXXX	129	A/H	A/J	B10	B/B	B/C	C3H	C57	DBA	LPJ	MRL	NZB	NZW	SMJ		AKR		BUB	FVB	LGJ
	5		2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	X	0	0	0		5,065,812

block 4	XXX	XXXX	AKR	B10	B/B	B/C	C3H	C57	DBA	MRL	NZB	NZW		129	A/H	A/J		BUB	FVB	LGJ	LPJ	SMJ
	10		2	2	2	2	2	2	2	2	2	2	X	1	1	1	X	0	0	0	0	0		10,723,877

block 5	XXX	B10	B/C	A/J	AKR	FVB	129	C57	A/H	LPJ	B/B	SMJ		C3H	BUB	DBA	NZB	NZW		MRL	LGJ
	28	2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,242,125
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,242,260
Dnahc5		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,242,380
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,267,968
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,268,039
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,268,217
		2	2	2	2	2	2	0	2	2	2	2	X	2	2	0	2	2	X	1	1	28,268,811
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	0	2	X	1	1	28,268,837
		2	2	2	2	2	2	0	2	2	2	2	X	2	2	0	2	2	X	1	1	28,268,842
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	0	2	X	1	1	28,268,929
		2	2	2	2	2	2	0	2	2	2	2	X	2	0	0	2	2	X	1	1	28,268,934
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	0	2	X	1	1	28,269,168
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	0	2	2	X	1	1	28,269,173
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	0	2	X	1	1	28,269,190
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	0	2	X	1	1	28,269,192
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	0	2	2	X	1	1	28,269,195
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	0	2	2	X	1	1	28,269,197
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	0	2	X	1	1	28,269,199
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	0	2	2	X	1	1	28,269,204
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	0	2	X	1	1	28,269,205
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	0	2	2	X	1	1	28,269,210
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	0	2	X	1	1	28,269,246
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	0	2	2	X	1	1	28,269,251
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,271,711
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,271,713
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,272,048
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,272,810
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,272,813
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,272,963
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,273,026
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,275,371
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,275,459
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,275,484
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,281,496
		2	2	2	2	2	2	2	0	2	2	2	X	2	2	2	2	2	X	1	1	28,284,032
		2	2	2	2	2	2	2	0	2	2	2	X	2	2	2	2	2	X	1	1	28,284,240
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,286,419
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,306,001
		2	2	2	2	2	2	2	2	0	0	0	X	1	1	1	0	1	X	1	1	28,311,510
		2	2	2	2	2	2	2	2	0	2	0	X	2	2	2	0	2	X	1	1	28,311,537
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	0	2	X	1	1	28,311,663
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	0	1	X	2	2	28,311,736
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	1	28,311,773
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	1	28,311,786
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	2	2	28,311,803
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	0	2	X	1	1	28,311,838
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	1	28,311,953
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	1	28,311,968
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,311,978
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	0	2	X	1	1	28,312,019
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	0	2	X	1	1	28,312,020
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	0	1	X	1	1	28,312,022
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	1	28,312,025
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	0	1	X	2	2	28,312,026
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	0	1	X	2	2	28,312,030
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	0	1	X	2	2	28,312,036
		2	2	2	2	2	2	2	2	2	2	0	X	1	1	1	0	1	X	1	1	28,312,056
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	2	2	28,312,896
		2	2	0	2	2	2	2	2	2	0	0	X	1	1	1	1	0	X	0	1	28,313,062
		2	2	2	2	2	2	2	2	0	2	0	X	1	1	1	1	0	X	2	2	28,314,263
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	2	2	28,314,277
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	1	28,314,444
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	1	28,314,501
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,314,715
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	1	28,314,937
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	2	2	28,315,144
		2	2	2	2	2	2	2	2	2	2	0	X	2	2	2	2	2	X	1	1	28,315,178
		2	2	2	2	2	2	2	2	2	2	0	X	1	1	1	1	1	X	1	1	28,315,179
		2	2	2	2	2	2	2	2	0	2	0	X	1	1	1	1	1	X	1	1	28,315,464
		2	2	2	2	2	2	2	2	0	2	0	X	1	1	1	1	1	X	1	0	28,315,483
		2	2	2	2	2	2	2	2	0	2	0	X	1	1	1	1	1	X	2	2	28,315,692
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,320,713
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,321,145
		2	2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	X	1	1	28,321,148
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,321,154
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,321,176
		2	2	0	2	2	2	2	2	2	2	0	X	2	2	2	0	2	X	1	1	28,321,251
		2	2	2	2	2	2	2	2	0	2	0	X	2	2	2	2	2	X	1	1	28,330,551
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	X	1	1	28,330,600
		2	2	2	2	2	2	2	2	0	0	2	X	2	2	2	2	2	X	1	1	28,331,616
		2	2	2	2	2	2	2	2	0	0	2	X	2	2	2	2	2	X	1	1	28,331,620
		2	2	2	2	2	2	2	2	2	2	2	X	2	2	2	2	0	X	1	1	28,331,687
		2	2	2	2	2	2	2	2	0	0	2	X	2	2	2	2	2	X	1	1