Chromosome 17 Haplotype

Chromosome 17

Run ID: 3301 Total SNPs: 2097 Total Blocks: 406 Coverage: .8 Minimum Strains: 9

block 1	XXX	XXXX	A/H	B/B	B10	C3H	DBA		C57	MRL	NZB	NZW	SMJ		AKR	LGJ	LPJ		129	A/J	B/C	BUB	FVB
4930524H12Rik	7		1	1	0	1	0	X	2	2	2	2	2	X	2	2	2	X	0	0	0	0	0		7,017,638
			2	2	2	0	2	X	1	1	1	1	1	X	2	0	0	X	0	0	0	0	0		7,017,662

block 2	XXX	XXXX	A/H	AKR	B/B	C57	DBA	LGJ	LPJ	MRL	NZB	NZW	SMJ		B/C		129	A/J	B10	BUB	C3H	FVB
			2	2	2	2	2	2	2	2	2	2	2	X	1	X	0	0	0	0	0	0		7,017,676

B10	B/C	MRL	B/B	SMJ	A/J	C3H	A/H	DBA		129	AKR	C57	NZB	NZW	LPJ	LGJ
2	2	2	2	2	2	0	2	2	X	1	1	1	1	1	1	1	X	7,046,025
2	2	2	2	2	2	0	2	2	X	1	1	1	1	1	1	1	X	7,046,062
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	7,047,878
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	7,048,020
2	2	2	2	2	0	2	0	0	X	1	1	1	1	1	1	0	X	7,048,376
2	2	2	2	2	2	2	0	0	X	1	1	1	1	1	1	0	X	7,048,402
2	2	2	2	2	2	2	0	0	X	1	1	1	1	1	0	0	X	7,048,433
2	2	2	2	2	2	2	0	0	X	1	1	1	1	1	1	0	X	7,048,470
1	1	1	0	0	0	1	0	0	X	2	2	2	2	2	2	2	X	7,049,322

XXX	129	A/H	A/J	B10	B/B	B/C	BUB	C3H	C57	DBA	FVB	LGJ	LPJ	MRL	NZW	SMJ	AKR		NZB
10	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	0	X	1	10,476,230
	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	0	X	1	10,476,337
	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	0	X	1	10,476,497
	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	0	X	1	10,476,576
	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	10,476,768
	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	10,476,819
	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	10,476,901
	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	10,477,168
	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	10,477,198
	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	10,477,212
	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	10,477,360

block 5	XXX	XXXX	A/H	A/J	B10	C3H	DBA	MRL	NZB	NZW	SMJ		FVB		129	AKR	B/B	B/C	BUB	C57	LGJ	LPJ
Park2			2	2	2	2	2	2	2	2	2	X	1	X	0	0	0	0	0	0	0	0		10,477,599

129	A/H	A/J	AKR	B10	B/B	B/C	BUB	C3H	C57	DBA	FVB	LGJ	LPJ	MRL	NZW	SMJ		NZB
2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	10,478,025
2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	10,647,626
2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	10,647,648
2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	10,648,325
2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	10,648,412
2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	10,648,498

block 7	XXX	XXXX	129	AKR	B/B	B/C	BUB	LGJ	LPJ		C57	FVB	NZW		A/H	A/J	B10	C3H	DBA	MRL	NZB	SMJ
			2	2	2	2	2	2	2	X	1	1	1	X	0	0	0	0	0	0	0	0		10,713,947

129	AKR	B/B	B/C	BUB	C57	FVB	LGJ	LPJ	NZW		A/H	A/J	B10	C3H	DBA	MRL	NZB	SMJ
2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	1	10,844,569
2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	1	10,844,588
2	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	1	10,844,591

block 9	XXX	XXXX	129	AKR	B/B	B/C	BUB	C57	FVB	LGJ	LPJ		A/H	A/J	B10	C3H	DBA	MRL	NZB	SMJ		NZW
			2	2	2	2	2	2	2	2	2	X	2	2	2	2	2	2	2	2	X	1		10,902,706
			2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	1	X	2		10,902,740

block 10	XXX	XXXX	129	A/H	A/J	B10	C3H	DBA	MRL	NZB	SMJ		AKR	B/B	B/C	BUB	C57	FVB	LGJ	LPJ	NZW
			1	1	1	1	1	1	1	1	1	X	2	2	2	2	2	2	2	2	2		10,902,774

A/H	A/J	B10	C3H	DBA	MRL	NZB	SMJ		AKR	B/B	B/C	C57	FVB	LGJ	LPJ	NZW		129	BUB
1	1	1	1	1	1	1	1	X	2	2	2	2	2	2	2	2	X	2	2	10,902,948
2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	1	X	2	2	10,902,960
2	2	2	2	2	2	2	2	X	2	2	2	2	2	2	2	2	X	1	1	10,903,011
2	2	2	2	2	2	2	2	X	2	2	2	2	2	2	2	2	X	1	1	10,903,271
1	1	1	1	1	1	1	1	X	2	2	2	2	2	2	2	2	X	2	2	10,903,338
1	1	1	1	1	1	1	1	X	2	2	2	2	2	2	2	2	X	2	2	10,903,497

XXX	129	AKR	B/C	C57	LGJ	NZB	NZW	B/B	LPJ		A/J	B10	C3H	MRL	SMJ	A/H	DBA
11	2	2	2	2	2	2	2	2	0	X	1	1	1	1	1	1	1	X	11,784,908
	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	11,784,968
	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	11,785,045
	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	11,785,077
	2	2	2	2	2	2	2	2	0	X	1	1	1	1	1	1	0	X	11,785,406
	2	2	2	2	2	2	2	0	2	X	1	1	1	1	1	1	1	X	11,786,087
	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	11,786,252
	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	11,786,429
	2	2	2	2	2	2	2	0	2	X	1	1	1	1	1	1	0	X	11,786,534
	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	0	0	X	11,786,669

block 13	XXX	XXXX	129	A/H	A/J	AKR	B10	B/B	B/C	C3H	C57	LGJ	LPJ	MRL	NZB	NZW	SMJ		DBA		BUB	FVB
			2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	X	0	0		11,786,768
			2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	X	0	0		11,786,781

block 14	129	AKR	B/B	B/C	C57	LGJ	LPJ	NZB	NZW		A/H	A/J	B10	MRL	C3H	SMJ	DBA
	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	0	X	11,786,794
Plg	2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	0	X	11,786,967
	2	2	2	2	2	2	2	2	2	X	1	1	1	1	0	0	1	X	11,789,995

block 15	XXX	XXXX	129	A/H	B10	B/B	C3H	C57	LGJ	MRL	NZW		B/C		A/J	AKR	BUB	DBA	FVB	LPJ	NZB	SMJ
			2	2	2	2	2	2	2	2	2	X	1	X	0	0	0	0	0	0	0	0		11,790,302

129	AKR	B/C	C57	LGJ	NZB	NZW	B/B	LPJ		A/J	B10	C3H	SMJ	A/H	MRL	DBA
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	0	X	11,790,857
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	11,790,890
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	0	X	11,790,899
2	2	2	2	2	2	2	0	0	X	1	1	1	1	1	0	0	X	11,790,973
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	0	X	11,791,364
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	0	X	11,791,447
2	2	2	2	2	2	2	2	2	X	1	1	1	1	0	1	1	X	11,791,598
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	11,791,705
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	11,791,928
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	11,792,943
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	11,792,962

block 17	XXX	XXXX	129	A/H	A/J	AKR	B10	B/B	B/C	C3H	C57	DBA	LGJ	LPJ	MRL	NZB	SMJ		NZW		BUB	FVB
			2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	X	1	X	0	0		11,796,382

B/C	C57	LGJ	LPJ	NZB	NZW	AKR	B/B	129		MRL	SMJ	A/J	C3H	A/H	B10	DBA		BUB	FVB
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	0	0	11,796,408
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	0	0	11,796,555
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	0	X	0	0	11,796,747
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	0	0	11,797,039
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	0	0	11,797,306
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	0	0	11,797,486
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	0	0	X	0	0	11,797,837
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	0	1	X	0	0	11,797,840
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	0	1	X	0	0	11,797,844
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	0	1	X	0	0	11,797,911
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	0	0	11,798,188
2	2	2	2	2	2	2	2	2	X	0	0	0	0	0	0	1	X	0	0	11,798,830
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	0	X	0	0	11,798,917
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	0	X	0	0	11,798,937
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	0	X	0	0	11,798,995
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	0	0	11,799,329
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	0	0	11,799,430
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	0	0	11,799,484
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	0	0	11,799,508
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	0	0	11,799,509
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	1	X	0	0	11,799,817
2	2	2	2	2	2	2	2	2	X	1	1	1	1	1	1	0	X	0	0	11,801,356
2	2	2	2	2	2	2	2	2	X